Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
StrcQ8VIM6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
StrcQ8VIM6 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 AC122197.2-201ENSMUST00000219196 1635 ntBASIC15.74■□□□□ 0.11
StrcQ8VIM6 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Fthl17d-201ENSMUST00000105004 856 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Gm6407-201ENSMUST00000176468 549 ntBASIC15.74■□□□□ 0.11
StrcQ8VIM6 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
StrcQ8VIM6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm13611-201ENSMUST00000118269 318 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm15131-201ENSMUST00000119124 595 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 4930447N08Rik-203ENSMUST00000198879 1157 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 AC135469.1-201ENSMUST00000225984 772 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm15515-201ENSMUST00000117827 822 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Omt2a-203ENSMUST00000166056 1167 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 AC159205.5-202ENSMUST00000224849 386 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm10179-201ENSMUST00000086233 688 ntBASIC15.73■□□□□ 0.11
StrcQ8VIM6 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
StrcQ8VIM6 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Gm6652-201ENSMUST00000186414 1070 ntBASIC15.72■□□□□ 0.11
StrcQ8VIM6 AC122876.1-201ENSMUST00000217619 825 ntBASIC15.72■□□□□ 0.11
StrcQ8VIM6 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 AC159308.2-201ENSMUST00000213592 2325 ntBASIC15.72■□□□□ 0.11
StrcQ8VIM6 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
StrcQ8VIM6 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Rec8-201ENSMUST00000002395 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm6506-201ENSMUST00000119775 1136 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm16296-201ENSMUST00000159905 325 ntBASIC15.71■□□□□ 0.11
StrcQ8VIM6 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC15.71■□□□□ 0.11
StrcQ8VIM6 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms