Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm27680-201ENSMUST00000184192 160 ntBASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm6888-201ENSMUST00000221983 706 ntBASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Vps39Q8R5L3 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Gm27618-201ENSMUST00000183671 60 ntBASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Vps39Q8R5L3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Vps39Q8R5L3 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Vps39Q8R5L3 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms