Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Rapgef2-201ENSMUST00000118100 6573 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
Nudcd3Q8R1N4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Gm27631-201ENSMUST00000184163 466 ntBASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Ntrk2-204ENSMUST00000224259 3049 ntBASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Nudcd3Q8R1N4 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Mir3113-201ENSMUST00000175478 76 ntBASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Nudcd3Q8R1N4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Nudcd3Q8R1N4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms