Protein–RNA interactions for Protein: Q8R1C3

Vopp1, Vesicular, overexpressed in cancer, prosurvival protein 1, mousemouse

Predictions only

Length 172 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vopp1Q8R1C3 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vopp1Q8R1C3 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vopp1Q8R1C3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
Vopp1Q8R1C3 Gm43134-201ENSMUST00000199434 1886 ntBASIC14.21□□□□□ -0.14
Vopp1Q8R1C3 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.21□□□□□ -0.14
Vopp1Q8R1C3 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gm38341-201ENSMUST00000195357 515 ntBASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gm38157-201ENSMUST00000194178 1698 ntBASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vopp1Q8R1C3 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Mir7221-201ENSMUST00000184009 72 ntBASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Vopp1Q8R1C3 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm5989-201ENSMUST00000096092 2077 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm24255-201ENSMUST00000104481 128 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm12539-201ENSMUST00000121549 1098 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm5637-201ENSMUST00000153890 1119 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm3961-201ENSMUST00000204425 994 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gm9368-201ENSMUST00000219348 831 ntBASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vopp1Q8R1C3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms