Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Cchcr1Q8K2I2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Cchcr1Q8K2I2 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Cd63-ps-201ENSMUST00000145417 875 ntBASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Cchcr1Q8K2I2 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm4782-201ENSMUST00000168705 2046 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm15240-201ENSMUST00000118156 720 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm27772-201ENSMUST00000184900 187 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm17837-201ENSMUST00000186435 985 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm18905-201ENSMUST00000205454 928 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 AC124751.1-201ENSMUST00000222716 1408 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Gm20632-201ENSMUST00000176760 2427 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Cchcr1Q8K2I2 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Gm38294-201ENSMUST00000192831 381 ntBASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Cchcr1Q8K2I2 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms