Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Clip4Q8CI96 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.71□□□□□ -0.21
Clip4Q8CI96 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.71□□□□□ -0.21
Clip4Q8CI96 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Rubie-203ENSMUST00000227803 2430 ntBASIC13.71□□□□□ -0.22
Clip4Q8CI96 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
Clip4Q8CI96 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Clip4Q8CI96 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.7□□□□□ -0.22
Clip4Q8CI96 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Clip4Q8CI96 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Gm16215-201ENSMUST00000161990 637 ntBASIC13.69□□□□□ -0.22
Clip4Q8CI96 Gm5866-201ENSMUST00000177881 973 ntBASIC13.69□□□□□ -0.22
Clip4Q8CI96 Gm29667-201ENSMUST00000190817 490 ntBASIC13.69□□□□□ -0.22
Clip4Q8CI96 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.69□□□□□ -0.22
Clip4Q8CI96 Gm7730-201ENSMUST00000212486 454 ntBASIC13.69□□□□□ -0.22
Clip4Q8CI96 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Clip4Q8CI96 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms