Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm27680-201ENSMUST00000184192 160 ntBASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gm27772-201ENSMUST00000184900 187 ntBASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Sox30Q8CGW4 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Sox30Q8CGW4 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sox30Q8CGW4 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm12403-201ENSMUST00000121384 959 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm3436-201ENSMUST00000179930 840 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 AC140397.2-201ENSMUST00000224213 834 ntBASIC14.83□□□□□ -0.04
Sox30Q8CGW4 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sox30Q8CGW4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Mir449b-201ENSMUST00000104833 80 ntBASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.82□□□□□ -0.04
Sox30Q8CGW4 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms