Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Qrich2-201ENSMUST00000093909 2156 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.43□□□□□ -0.26
Ccdc28bQ8CEG5 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Gm2651-201ENSMUST00000203560 838 ntBASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Gm20553-201ENSMUST00000204205 844 ntBASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Gm18027-201ENSMUST00000218947 619 ntBASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 AC138767.1-201ENSMUST00000222661 415 ntBASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Ccdc28bQ8CEG5 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm43321-201ENSMUST00000198897 2409 ntBASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm13823-201ENSMUST00000119930 345 ntBASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc28bQ8CEG5 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms