Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ccdc87Q8CDL9 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Gm37277-201ENSMUST00000194052 1111 ntBASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ccdc87Q8CDL9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm6222-201ENSMUST00000120787 396 ntBASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm27618-201ENSMUST00000183671 60 ntBASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm27622-201ENSMUST00000183779 60 ntBASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gm17837-201ENSMUST00000186435 985 ntBASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 AC126408.1-201ENSMUST00000225184 523 ntBASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Ccdc87Q8CDL9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms