Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Vcpip1Q8CDG3 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Gm44891-201ENSMUST00000208817 2223 ntBASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Gm46209-201ENSMUST00000217912 553 ntBASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Vcpip1Q8CDG3 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm4804-201ENSMUST00000182234 999 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm6283-201ENSMUST00000182369 1000 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm27680-201ENSMUST00000184192 160 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Vcpip1Q8CDG3 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm12151-201ENSMUST00000121374 290 ntBASIC14.6□□□□□ -0.07
Vcpip1Q8CDG3 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms