Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gm37691-201ENSMUST00000192147 2573 ntBASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Acot6-202ENSMUST00000222921 3622 ntBASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Gm15371-201ENSMUST00000117057 784 ntBASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Gm9257-201ENSMUST00000221254 232 ntBASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC15.7■□□□□ 0.1
Shisa4Q8CA71 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Gm5466-201ENSMUST00000119395 1890 ntBASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.69■□□□□ 0.1
Shisa4Q8CA71 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Abhd6-203ENSMUST00000225234 1958 ntBASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Shisa4Q8CA71 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gm24196-201ENSMUST00000179161 110 ntBASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gm7561-201ENSMUST00000211203 886 ntBASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 AC159474.1-201ENSMUST00000218454 374 ntTSL 3 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Shisa4Q8CA71 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa4Q8CA71 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Shisa4Q8CA71 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms