Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cfap54Q8C6S9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm27552-201ENSMUST00000183351 62 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm27844-201ENSMUST00000183613 62 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm8712-201ENSMUST00000221090 701 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm8385-201ENSMUST00000058999 643 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm43830-201ENSMUST00000198760 1067 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Mrap2-201ENSMUST00000049457 1931 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Sorbs3-204ENSMUST00000227929 2460 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Gm38144-201ENSMUST00000192790 465 ntBASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Cfap54Q8C6S9 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.74□□□□□ -0.37
Cfap54Q8C6S9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Mir698-201ENSMUST00000102164 109 ntBASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Gm16202-201ENSMUST00000117532 544 ntBASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Gm4768-201ENSMUST00000206199 686 ntBASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Cfap54Q8C6S9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms