Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Gm23936-201ENSMUST00000179354 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm22619-201ENSMUST00000179516 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25255-201ENSMUST00000179579 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24755-201ENSMUST00000179691 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm26506-201ENSMUST00000179692 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm25086-201ENSMUST00000179931 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm23243-201ENSMUST00000180047 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24659-201ENSMUST00000180212 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm24169-201ENSMUST00000180244 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm23689-201ENSMUST00000180354 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm27359-201ENSMUST00000184153 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm27785-201ENSMUST00000184268 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm27466-201ENSMUST00000184396 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm27703-201ENSMUST00000184836 110 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 AW822252-206ENSMUST00000208904 237 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Gm5939-201ENSMUST00000119613 2874 ntBASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Cdhr3Q8BL00 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm15460-201ENSMUST00000118147 391 ntBASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm21470-201ENSMUST00000187680 696 ntBASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.87□□□□□ -0.51
Cdhr3Q8BL00 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Kcnk16-202ENSMUST00000225596 2127 ntBASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gm8927-201ENSMUST00000181978 981 ntBASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Gm3222-201ENSMUST00000071282 990 ntBASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cdhr3Q8BL00 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms