Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm19166-201ENSMUST00000196041 1063 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm11531-201ENSMUST00000117614 555 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm10051-201ENSMUST00000145209 414 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm18734-201ENSMUST00000172937 808 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm44262-201ENSMUST00000204969 372 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm19163-201ENSMUST00000223313 780 ntBASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Nppc-201ENSMUST00000027449 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Smg1Q8BKX6 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm11637-201ENSMUST00000120601 592 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm42779-201ENSMUST00000198807 406 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm9555-201ENSMUST00000200908 583 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm44069-201ENSMUST00000204898 506 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm45224-201ENSMUST00000208203 414 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Gm5950-201ENSMUST00000213337 772 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 AC132901.1-201ENSMUST00000224345 508 ntBASIC11.21□□□□□ -0.61
Smg1Q8BKX6 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Gm8325-201ENSMUST00000099086 453 ntBASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Smg1Q8BKX6 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Gm43916-201ENSMUST00000205062 967 ntBASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Mir497b-201ENSMUST00000093601 125 ntBASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Gm9755-201ENSMUST00000032981 1356 ntBASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Smg1Q8BKX6 Gm17391-201ENSMUST00000171036 126 ntBASIC11.2□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms