Protein–RNA interactions for Protein: Q8BJA3

Hmbox1, Homeobox-containing protein 1, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmbox1Q8BJA3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmbox1Q8BJA3 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.33□□□□□ -0.28
Hmbox1Q8BJA3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.33□□□□□ -0.28
Hmbox1Q8BJA3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Hmbox1Q8BJA3 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Hmbox1Q8BJA3 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Gm9816-201ENSMUST00000122292 1414 ntBASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Gm45784-201ENSMUST00000188360 142 ntBASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Hmbox1Q8BJA3 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm45740-201ENSMUST00000212103 2003 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm6222-201ENSMUST00000120787 396 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm45098-201ENSMUST00000207179 657 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm17794-201ENSMUST00000220252 955 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Hmbox1Q8BJA3 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Gm6244-201ENSMUST00000178732 841 ntBASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Gm27631-201ENSMUST00000184163 466 ntBASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 4930449I04Rik-201ENSMUST00000198191 1123 ntBASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Gm7619-201ENSMUST00000210649 1282 ntBASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Hmbox1Q8BJA3 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms