Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Rnf38Q8BI21 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf38Q8BI21 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf38Q8BI21 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf38Q8BI21 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Rnf38Q8BI21 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Mir449b-201ENSMUST00000104833 80 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Gm25925-201ENSMUST00000158314 306 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Gm7774-201ENSMUST00000200064 533 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Shd-206ENSMUST00000225145 998 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.14□□□□□ -0.31
Rnf38Q8BI21 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Gm18041-201ENSMUST00000218210 618 ntBASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Rnf38Q8BI21 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Rnf38Q8BI21 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms