Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Gm45643-201ENSMUST00000211364 1484 ntBASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.89□□□□□ -0.51
Slc5a7Q8BGY9 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm27628-201ENSMUST00000184911 107 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Gm10060-201ENSMUST00000212002 111 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 AC159196.2-201ENSMUST00000224082 1622 ntBASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Slc5a7Q8BGY9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Msh4-201ENSMUST00000005630 3325 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 AA543401-201ENSMUST00000164248 1269 ntBASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Gm18027-201ENSMUST00000218947 619 ntBASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Tmed9-203ENSMUST00000224741 1450 ntBASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 AC164702.1-201ENSMUST00000220135 2212 ntBASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Slc5a7Q8BGY9 Glis3-202ENSMUST00000112612 3016 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Slc5a7Q8BGY9 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 86.1 ms