Protein–RNA interactions for Protein: Q8BGE6

Atg4b, Cysteine protease ATG4B, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4bQ8BGE6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Atg4bQ8BGE6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Ntrk2-209ENSMUST00000225950 2640 ntBASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 CT030684.3-201ENSMUST00000227308 2445 ntBASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Atg4bQ8BGE6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gm15376-201ENSMUST00000122258 783 ntBASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Gm25925-201ENSMUST00000158314 306 ntBASIC12.79□□□□□ -0.36
Atg4bQ8BGE6 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms