Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC15.19■□□□□ 0.02
Trnp1Q80ZI1 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm12566-201ENSMUST00000121479 359 ntBASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm34767-201ENSMUST00000191813 1062 ntBASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm44967-201ENSMUST00000207047 631 ntBASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 AC139054.1-201ENSMUST00000226898 1598 ntBASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trnp1Q80ZI1 Gm8862-201ENSMUST00000198379 1346 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm11960-202ENSMUST00000181063 2858 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm7857-201ENSMUST00000117957 358 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm14130-201ENSMUST00000118417 987 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm15276-201ENSMUST00000145953 498 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm42997-202ENSMUST00000200321 985 ntBASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Btbd3-202ENSMUST00000091556 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trnp1Q80ZI1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
Trnp1Q80ZI1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms