Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Prpf40bQ80W14 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Gm42769-201ENSMUST00000198576 1659 ntBASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Gm24644-201ENSMUST00000157114 139 ntBASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Prpf40bQ80W14 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm2639-201ENSMUST00000156881 1297 ntBASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm10275-202ENSMUST00000168697 495 ntBASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm24196-201ENSMUST00000179161 110 ntBASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm27516-201ENSMUST00000184237 98 ntBASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm10275-201ENSMUST00000092620 635 ntBASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC15.66■□□□□ 0.1
Prpf40bQ80W14 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm15240-201ENSMUST00000118156 720 ntBASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm11524-201ENSMUST00000119349 807 ntBASIC15.65■□□□□ 0.1
Prpf40bQ80W14 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm38266-201ENSMUST00000194931 421 ntBASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Gm18905-201ENSMUST00000205454 928 ntBASIC15.65■□□□□ 0.1
Prpf40bQ80W14 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms