Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 AC113441.2-201ENSMUST00000221538 1468 ntBASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.38■□□□□ 0.05
Ddx55Q6ZPL9 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm4819-201ENSMUST00000182170 1009 ntBASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm5363-201ENSMUST00000211927 938 ntBASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Gm45212-201ENSMUST00000205831 3403 ntBASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Ddx55Q6ZPL9 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Gm11222-201ENSMUST00000119005 738 ntBASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Gm26185-201ENSMUST00000157692 266 ntBASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Gm18584-201ENSMUST00000203098 964 ntBASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Ddx55Q6ZPL9 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Gm5896-201ENSMUST00000189662 1024 ntBASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 AC155637.1-201ENSMUST00000218560 636 ntBASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Ddx55Q6ZPL9 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms