Protein–RNA interactions for Protein: Q6PIP5

Nudcd1, NudC domain-containing protein 1, mousemouse

Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd1Q6PIP5 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Gm13689-201ENSMUST00000119360 685 ntBASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Nudcd1Q6PIP5 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Nudcd1Q6PIP5 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm4984-201ENSMUST00000115987 360 ntBASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm27486-201ENSMUST00000184923 80 ntBASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gp9-201ENSMUST00000032133 881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Nudcd1Q6PIP5 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm15770-201ENSMUST00000117498 584 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Mir7085-201ENSMUST00000184353 66 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm44799-201ENSMUST00000207639 1202 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Nudcd1Q6PIP5 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Nudcd1Q6PIP5 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.68□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms