Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Gm15678-201ENSMUST00000117573 960 ntBASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Gm18766-201ENSMUST00000189811 808 ntBASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Dupd1-202ENSMUST00000224735 548 ntBASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Scaf4Q6PFF0 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.27
Scaf4Q6PFF0 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
Scaf4Q6PFF0 AC116503.1-201ENSMUST00000215445 2192 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm12428-201ENSMUST00000119844 727 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm29541-201ENSMUST00000191351 678 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm10175-201ENSMUST00000086013 645 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Scaf4Q6PFF0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Scaf4Q6PFF0 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms