Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Slc46a1Q6PEM8 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gm9816-201ENSMUST00000122292 1414 ntBASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gm27839-201ENSMUST00000184242 106 ntBASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.98□□□□□ -0.49
Slc46a1Q6PEM8 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 CT030684.3-201ENSMUST00000227308 2445 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm5303-201ENSMUST00000117943 1252 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm12485-201ENSMUST00000119641 291 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm15429-201ENSMUST00000151268 798 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm3809-201ENSMUST00000180973 1006 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm27772-201ENSMUST00000184900 187 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm44719-201ENSMUST00000206404 149 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm37691-201ENSMUST00000192147 2573 ntBASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Slc46a1Q6PEM8 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc46a1Q6PEM8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms