Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Olfr286-202ENSMUST00000205305 969 ntBASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm9449-201ENSMUST00000207265 1011 ntBASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf220Q6PDX6 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Gm16026-204ENSMUST00000162652 683 ntBASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.87□□□□□ -0.35
Rnf220Q6PDX6 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 AC164629.2-201ENSMUST00000217916 270 ntBASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 AC130671.1-201ENSMUST00000227384 1237 ntBASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rnf220Q6PDX6 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rnf220Q6PDX6 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms