Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smarcd3Q6P9Z1 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm37795-201ENSMUST00000194216 2459 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22065-201ENSMUST00000103753 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22066-201ENSMUST00000103761 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24932-201ENSMUST00000103763 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24115-201ENSMUST00000103799 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22190-201ENSMUST00000103827 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22191-201ENSMUST00000103831 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24721-201ENSMUST00000103849 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm28018-201ENSMUST00000103869 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm26399-201ENSMUST00000103937 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25349-201ENSMUST00000177728 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm23616-201ENSMUST00000177797 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25871-201ENSMUST00000177816 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24752-201ENSMUST00000178240 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24496-201ENSMUST00000178287 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25649-201ENSMUST00000178476 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25548-201ENSMUST00000178681 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm23147-201ENSMUST00000178841 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm26095-201ENSMUST00000179270 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22171-201ENSMUST00000179283 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm23936-201ENSMUST00000179354 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm22619-201ENSMUST00000179516 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25255-201ENSMUST00000179579 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24755-201ENSMUST00000179691 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm26506-201ENSMUST00000179692 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm25086-201ENSMUST00000179931 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm23243-201ENSMUST00000180047 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24659-201ENSMUST00000180212 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm24169-201ENSMUST00000180244 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm23689-201ENSMUST00000180354 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27359-201ENSMUST00000184153 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27785-201ENSMUST00000184268 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27466-201ENSMUST00000184396 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm27703-201ENSMUST00000184836 110 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm44335-201ENSMUST00000196879 141 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm44297-201ENSMUST00000198304 141 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm44346-201ENSMUST00000198851 141 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm6916-202ENSMUST00000205523 195 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm16476-201ENSMUST00000221544 139 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm5867-201ENSMUST00000063197 592 ntBASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 Elf1-201ENSMUST00000040131 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smarcd3Q6P9Z1 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms