Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Gm15770-201ENSMUST00000117498 584 ntBASIC13.38□□□□□ -0.27
VclQ64727 Gm23984-201ENSMUST00000157139 203 ntBASIC13.38□□□□□ -0.27
VclQ64727 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.38□□□□□ -0.27
VclQ64727 Gm43094-201ENSMUST00000196549 921 ntBASIC13.38□□□□□ -0.27
VclQ64727 Gm9794-201ENSMUST00000202370 423 ntBASIC13.38□□□□□ -0.27
VclQ64727 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.38□□□□□ -0.27
VclQ64727 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.38□□□□□ -0.27
VclQ64727 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
VclQ64727 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VclQ64727 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.37□□□□□ -0.27
VclQ64727 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.37□□□□□ -0.27
VclQ64727 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.37□□□□□ -0.27
VclQ64727 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC13.37□□□□□ -0.27
VclQ64727 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.37□□□□□ -0.27
VclQ64727 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.37□□□□□ -0.27
VclQ64727 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
VclQ64727 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.37□□□□□ -0.27
VclQ64727 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
VclQ64727 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.37□□□□□ -0.27
VclQ64727 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
VclQ64727 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
VclQ64727 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.36□□□□□ -0.27
VclQ64727 Gm11424-201ENSMUST00000121929 829 ntBASIC13.36□□□□□ -0.27
VclQ64727 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC13.36□□□□□ -0.27
VclQ64727 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.36□□□□□ -0.27
VclQ64727 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Gm6180-201ENSMUST00000065243 498 ntBASIC13.36□□□□□ -0.27
VclQ64727 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.36□□□□□ -0.27
VclQ64727 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
VclQ64727 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
VclQ64727 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
VclQ64727 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.35□□□□□ -0.27
VclQ64727 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.35□□□□□ -0.27
VclQ64727 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.35□□□□□ -0.27
VclQ64727 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.35□□□□□ -0.27
VclQ64727 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.35□□□□□ -0.27
VclQ64727 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC13.35□□□□□ -0.27
VclQ64727 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.35□□□□□ -0.27
VclQ64727 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Gm4129-201ENSMUST00000220083 625 ntTSL 3 BASIC13.35□□□□□ -0.27
VclQ64727 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.35□□□□□ -0.27
VclQ64727 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
VclQ64727 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
VclQ64727 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
VclQ64727 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms