Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm27501-201ENSMUST00000183599 107 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm38002-201ENSMUST00000193255 180 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm37008-201ENSMUST00000195712 319 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm17823-201ENSMUST00000217830 1006 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 Itm2b-204ENSMUST00000228637 783 ntBASIC17.19■□□□□ 0.34
Clcn1Q64347 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Clcn1Q64347 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC17.19■□□□□ 0.34
Clcn1Q64347 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm12020-201ENSMUST00000119030 2042 ntBASIC17.18■□□□□ 0.34
Clcn1Q64347 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm10327-201ENSMUST00000105222 1002 ntBASIC17.18■□□□□ 0.34
Clcn1Q64347 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm16124-201ENSMUST00000146938 516 ntTSL 2 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm7584-201ENSMUST00000175829 940 ntBASIC17.18■□□□□ 0.34
Clcn1Q64347 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.18■□□□□ 0.34
Clcn1Q64347 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Clcn1Q64347 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Clcn1Q64347 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Kcnk16-202ENSMUST00000225596 2127 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm8213-201ENSMUST00000118191 441 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12537-201ENSMUST00000119266 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12403-201ENSMUST00000121384 959 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm4271-201ENSMUST00000174444 973 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.17■□□□□ 0.34
Clcn1Q64347 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.17■□□□□ 0.34
Clcn1Q64347 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Clcn1Q64347 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC17.16■□□□□ 0.34
Clcn1Q64347 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Clcn1Q64347 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms