Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn9aQ62205 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC15.68■□□□□ 0.1
Scn9aQ62205 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.68■□□□□ 0.1
Scn9aQ62205 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Scn9aQ62205 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm6370-201ENSMUST00000110611 1142 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm12539-201ENSMUST00000121549 1098 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm5597-201ENSMUST00000182353 1193 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm3096-201ENSMUST00000185770 364 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm5884-201ENSMUST00000036712 1479 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gm25700-201ENSMUST00000177693 110 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 AC166051.1-201ENSMUST00000214313 210 ntBASIC15.67■□□□□ 0.1
Scn9aQ62205 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC15.67■□□□□ 0.1
Scn9aQ62205 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Scn9aQ62205 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC15.66■□□□□ 0.1
Scn9aQ62205 Mir1943-201ENSMUST00000158276 73 ntBASIC15.66■□□□□ 0.1
Scn9aQ62205 Gm44100-201ENSMUST00000204329 436 ntBASIC15.66■□□□□ 0.1
Scn9aQ62205 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 AC101945.2-201ENSMUST00000227886 1377 ntBASIC15.66■□□□□ 0.1
Scn9aQ62205 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC15.66■□□□□ 0.1
Scn9aQ62205 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Gm43399-201ENSMUST00000202546 2374 ntBASIC15.66■□□□□ 0.1
Scn9aQ62205 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Gm8856-201ENSMUST00000185254 1144 ntBASIC15.66■□□□□ 0.1
Scn9aQ62205 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC15.66■□□□□ 0.1
Scn9aQ62205 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC15.66■□□□□ 0.1
Scn9aQ62205 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Scn9aQ62205 Crry-ps-201ENSMUST00000079090 1309 ntBASIC15.65■□□□□ 0.1
Scn9aQ62205 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC15.65■□□□□ 0.1
Scn9aQ62205 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Scn9aQ62205 Gm17208-201ENSMUST00000168388 535 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms