Protein–RNA interactions for Protein: Q62141

Sin3b, Paired amphipathic helix protein Sin3b, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sin3bQ62141 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sin3bQ62141 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sin3bQ62141 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Sin3bQ62141 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Sin3bQ62141 Gm4782-201ENSMUST00000168705 2046 ntBASIC14.48□□□□□ -0.09
Sin3bQ62141 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Mir6956-201ENSMUST00000183598 62 ntBASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm17837-201ENSMUST00000186435 985 ntBASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 AC124751.1-201ENSMUST00000222716 1408 ntBASIC14.47□□□□□ -0.09
Sin3bQ62141 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Sin3bQ62141 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Sin3bQ62141 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gm4804-201ENSMUST00000182234 999 ntBASIC14.46□□□□□ -0.09
Sin3bQ62141 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gm6888-201ENSMUST00000221983 706 ntBASIC14.46□□□□□ -0.09
Sin3bQ62141 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Sin3bQ62141 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.46□□□□□ -0.09
Sin3bQ62141 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Sin3bQ62141 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Sin3bQ62141 Gm5939-201ENSMUST00000119613 2874 ntBASIC14.46□□□□□ -0.1
Sin3bQ62141 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.46□□□□□ -0.1
Sin3bQ62141 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sin3bQ62141 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.46□□□□□ -0.1
Sin3bQ62141 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sin3bQ62141 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sin3bQ62141 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sin3bQ62141 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Sin3bQ62141 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sin3bQ62141 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Sin3bQ62141 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Sin3bQ62141 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sin3bQ62141 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.45□□□□□ -0.1
Sin3bQ62141 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.45□□□□□ -0.1
Sin3bQ62141 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 106.2 ms