Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 AC121598.1-201ENSMUST00000228224 1019 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Oosp3-201ENSMUST00000069760 807 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Mir125a-201ENSMUST00000083545 68 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC10.15□□□□□ -0.78
Foxc1Q61572 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 BC001981-202ENSMUST00000191393 1545 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Gm43205-201ENSMUST00000198622 1968 ntBASIC10.15□□□□□ -0.78
Foxc1Q61572 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.78
Foxc1Q61572 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.79
Foxc1Q61572 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Foxc1Q61572 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC10.15□□□□□ -0.79
Foxc1Q61572 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC10.15□□□□□ -0.79
Foxc1Q61572 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC10.15□□□□□ -0.79
Foxc1Q61572 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.15□□□□□ -0.79
Foxc1Q61572 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC10.15□□□□□ -0.79
Foxc1Q61572 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gatad1-204ENSMUST00000196304 704 ntTSL 3 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Olfr838-ps1-201ENSMUST00000211872 977 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 AC102291.3-201ENSMUST00000226566 405 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 AC156016.3-201ENSMUST00000228623 344 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gm2423-201ENSMUST00000074863 733 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Olfr1233-201ENSMUST00000099784 1042 ntAPPRIS P1 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC10.14□□□□□ -0.79
Foxc1Q61572 Syt7-205ENSMUST00000224135 1557 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 AC140393.3-201ENSMUST00000228396 1352 ntBASIC10.14□□□□□ -0.79
Foxc1Q61572 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
Foxc1Q61572 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 4833412K13Rik-201ENSMUST00000195509 1479 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
Foxc1Q61572 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm15957-201ENSMUST00000118893 974 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC10.13□□□□□ -0.79
Foxc1Q61572 Gm16215-201ENSMUST00000161990 637 ntBASIC10.13□□□□□ -0.79
Foxc1Q61572 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC10.13□□□□□ -0.79
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms