Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Vsx2Q61412 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Gm7488-201ENSMUST00000117148 684 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.26□□□□□ -0.29
Vsx2Q61412 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 Gm10766-202ENSMUST00000194123 606 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Gm45195-201ENSMUST00000205597 1008 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Gm9797-201ENSMUST00000052902 613 ntBASIC13.26□□□□□ -0.29
Vsx2Q61412 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vsx2Q61412 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.26□□□□□ -0.29
Vsx2Q61412 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Vsx2Q61412 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm21854-201ENSMUST00000179901 471 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Vsx2Q61412 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Vsx2Q61412 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.25□□□□□ -0.29
Vsx2Q61412 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.25□□□□□ -0.29
Vsx2Q61412 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Vsx2Q61412 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.24□□□□□ -0.29
Vsx2Q61412 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms