Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm11745-201ENSMUST00000121669 448 ntBASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gm9824-201ENSMUST00000178707 561 ntBASIC12.96□□□□□ -0.33
Nr1h4Q60641 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.96□□□□□ -0.33
Nr1h4Q60641 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.96□□□□□ -0.33
Nr1h4Q60641 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Nr1h4Q60641 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.96□□□□□ -0.34
Nr1h4Q60641 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Nr1h4Q60641 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm25287-201ENSMUST00000103846 110 ntBASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm22918-201ENSMUST00000103855 110 ntBASIC12.95□□□□□ -0.34
Nr1h4Q60641 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm5566-201ENSMUST00000116118 459 ntBASIC12.95□□□□□ -0.34
Nr1h4Q60641 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Nr1h4Q60641 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm13015-201ENSMUST00000118674 204 ntBASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.94□□□□□ -0.34
Nr1h4Q60641 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.94□□□□□ -0.34
Nr1h4Q60641 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
Nr1h4Q60641 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Nr1h4Q60641 Gm10175-201ENSMUST00000086013 645 ntBASIC12.94□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms