Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Gm15920-201ENSMUST00000118998 402 ntBASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Gm17795-201ENSMUST00000214505 757 ntBASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim38Q5SZ99 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Mir7684-201ENSMUST00000183858 60 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 AC155298.2-201ENSMUST00000225485 6226 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.1□□□□□ -0.15
Trim38Q5SZ99 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Mir8102-201ENSMUST00000184148 139 ntBASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Gm18041-201ENSMUST00000218210 618 ntBASIC14.09□□□□□ -0.15
Trim38Q5SZ99 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Gm5867-201ENSMUST00000063197 592 ntBASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.09□□□□□ -0.15
Trim38Q5SZ99 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim38Q5SZ99 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 113.6 ms