Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Tm6sf2-201ENSMUST00000049197 1418 ntAPPRIS P3 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Xpnpep1-209ENSMUST00000183108 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Gm5253-201ENSMUST00000187104 1025 ntBASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 AC160338.1-201ENSMUST00000214232 705 ntBASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Trav3-3Q5R1C3 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm37500-201ENSMUST00000192059 1443 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm9682-201ENSMUST00000197505 556 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm6089-201ENSMUST00000197666 938 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Mfsd7a-201ENSMUST00000031455 2508 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm37472-201ENSMUST00000192342 4052 ntBASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav3-3Q5R1C3 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 4933434E20Rik-206ENSMUST00000160640 2510 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 BC003331-203ENSMUST00000097546 3174 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 AC122860.2-201ENSMUST00000217967 2671 ntBASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav3-3Q5R1C3 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 42.6 ms