Protein–RNA interactions for Protein: Q505G4

Rtl6, Retrotransposon Gag-like protein 6, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtl6Q505G4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Naa50-201ENSMUST00000063520 3557 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Rtl6Q505G4 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gm11424-201ENSMUST00000121929 829 ntBASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Mir6392-201ENSMUST00000184924 108 ntBASIC11.61□□□□□ -0.55
Rtl6Q505G4 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gm6180-201ENSMUST00000065243 498 ntBASIC11.61□□□□□ -0.55
Rtl6Q505G4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.61□□□□□ -0.55
Rtl6Q505G4 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm12091-201ENSMUST00000146791 830 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm5354-201ENSMUST00000182417 973 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm6745-201ENSMUST00000199216 526 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Gm45668-201ENSMUST00000211271 493 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rtl6Q505G4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.6□□□□□ -0.55
Rtl6Q505G4 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms