Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Gm22331-201ENSMUST00000158066 136 ntBASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rc3h1Q4VGL6 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Gm24644-201ENSMUST00000157114 139 ntBASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rc3h1Q4VGL6 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Gm14660-201ENSMUST00000119809 575 ntBASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Gm10156-201ENSMUST00000122364 462 ntBASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.66■□□□□ 0.1
Rc3h1Q4VGL6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rc3h1Q4VGL6 Gm27731-201ENSMUST00000185192 107 ntBASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 41.8 ms