Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 AA543401-201ENSMUST00000164248 1269 ntBASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 AC139350.3-201ENSMUST00000226151 420 ntBASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 AC154747.3-201ENSMUST00000224471 3470 ntBASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ccdc27Q3V036 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gm9719-201ENSMUST00000162765 543 ntBASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ccdc27Q3V036 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Gm18263-201ENSMUST00000220846 1928 ntBASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ccdc27Q3V036 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Mir125a-201ENSMUST00000083545 68 ntBASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc27Q3V036 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc27Q3V036 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Gm10253-201ENSMUST00000194270 940 ntBASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC17.31■□□□□ 0.36
Ccdc27Q3V036 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms