Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm15427-201ENSMUST00000117288 531 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm6222-201ENSMUST00000120787 396 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm37714-201ENSMUST00000194742 342 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm6443-201ENSMUST00000203599 874 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm18195-201ENSMUST00000207604 706 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Gm44414-201ENSMUST00000203660 2109 ntBASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Cnga4Q3UW12 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cnga4Q3UW12 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.2
Cnga4Q3UW12 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Cnga4Q3UW12 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Gm27741-201ENSMUST00000185060 237 ntBASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Cnga4Q3UW12 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm14140-201ENSMUST00000119999 995 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm44492-201ENSMUST00000197012 141 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Cnga4Q3UW12 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms