Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Rubie-203ENSMUST00000227803 2430 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Gm15276-201ENSMUST00000145953 498 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Gm27023-201ENSMUST00000182372 285 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Gm3508-201ENSMUST00000186012 792 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Gm19163-201ENSMUST00000223313 780 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Cga-201ENSMUST00000029975 687 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Rpl10a-ps2-201ENSMUST00000071184 642 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Gm43399-201ENSMUST00000202546 2374 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Abhd6-203ENSMUST00000225234 1958 ntBASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Fam196aQ3USH1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Etfrf1-202ENSMUST00000111719 968 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Mir1943-201ENSMUST00000158276 73 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Gm38317-201ENSMUST00000195564 343 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 AC153974.2-201ENSMUST00000218577 1025 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Sybu-209ENSMUST00000228639 4113 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Fam196aQ3USH1 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Fam196aQ3USH1 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm9083-201ENSMUST00000120423 819 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm16479-201ENSMUST00000121706 932 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm13570-201ENSMUST00000140763 309 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm8546-201ENSMUST00000178288 1264 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm37835-201ENSMUST00000193305 361 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gm14267-206ENSMUST00000226870 1209 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Fam196aQ3USH1 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms