Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Nlrc4Q3UP24 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gm27701-201ENSMUST00000184498 110 ntBASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gm2495-201ENSMUST00000191160 466 ntBASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.3□□□□□ -0.12
Nlrc4Q3UP24 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm28911-201ENSMUST00000188837 117 ntBASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm45059-201ENSMUST00000205558 1077 ntBASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Nlrc4Q3UP24 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gm15429-201ENSMUST00000151268 798 ntBASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gm7653-201ENSMUST00000214567 508 ntBASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Nlrc4Q3UP24 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms