Protein–RNA interactions for Protein: Q3UH68

Limch1, LIM and calponin homology domains-containing protein 1, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limch1Q3UH68 AC154687.2-201ENSMUST00000223853 640 ntBASIC16.01■□□□□ 0.15
Limch1Q3UH68 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Limch1Q3UH68 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16■□□□□ 0.15
Limch1Q3UH68 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC16■□□□□ 0.15
Limch1Q3UH68 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16■□□□□ 0.15
Limch1Q3UH68 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC16■□□□□ 0.15
Limch1Q3UH68 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
Limch1Q3UH68 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Limch1Q3UH68 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.99■□□□□ 0.15
Limch1Q3UH68 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gm13385-201ENSMUST00000121089 220 ntBASIC15.99■□□□□ 0.15
Limch1Q3UH68 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gm8602-201ENSMUST00000184045 607 ntBASIC15.99■□□□□ 0.15
Limch1Q3UH68 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.99■□□□□ 0.15
Limch1Q3UH68 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC15.99■□□□□ 0.15
Limch1Q3UH68 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
Limch1Q3UH68 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Gm11918-201ENSMUST00000121660 179 ntBASIC15.98■□□□□ 0.15
Limch1Q3UH68 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Mir6392-201ENSMUST00000184924 108 ntBASIC15.98■□□□□ 0.15
Limch1Q3UH68 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 Gm6198-201ENSMUST00000191337 2929 ntBASIC15.98■□□□□ 0.15
Limch1Q3UH68 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Limch1Q3UH68 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.98■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms