Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 AC238811.1-201ENSMUST00000225302 441 ntBASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Brf2Q3UAW9 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm25925-201ENSMUST00000158314 306 ntBASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm27772-201ENSMUST00000184900 187 ntBASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gm44872-201ENSMUST00000207864 420 ntBASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.8□□□□□ -0.36
Brf2Q3UAW9 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Vamp8-202ENSMUST00000142613 2076 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm15240-201ENSMUST00000118156 720 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm27306-201ENSMUST00000183970 107 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm5867-201ENSMUST00000063197 592 ntBASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Brf2Q3UAW9 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 65.4 ms