Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 AC135669.1-201ENSMUST00000213585 412 ntBASIC11.32□□□□□ -0.6
Tff1Q08423 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Tff1Q08423 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Tff1Q08423 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC11.31□□□□□ -0.6
Tff1Q08423 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.31□□□□□ -0.6
Tff1Q08423 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC11.31□□□□□ -0.6
Tff1Q08423 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.31□□□□□ -0.6
Tff1Q08423 Syt7-205ENSMUST00000224135 1557 ntBASIC11.31□□□□□ -0.6
Tff1Q08423 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Gm42466-201ENSMUST00000202099 1301 ntBASIC11.31□□□□□ -0.6
Tff1Q08423 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC11.31□□□□□ -0.6
Tff1Q08423 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Tff1Q08423 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Tff1Q08423 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tff1Q08423 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Tff1Q08423 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Tff1Q08423 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC11.3□□□□□ -0.6
Tff1Q08423 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.3□□□□□ -0.6
Tff1Q08423 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.3□□□□□ -0.6
Tff1Q08423 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tff1Q08423 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Tff1Q08423 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC11.3□□□□□ -0.6
Tff1Q08423 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Gm16215-201ENSMUST00000161990 637 ntBASIC11.3□□□□□ -0.6
Tff1Q08423 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.3□□□□□ -0.6
Tff1Q08423 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Tff1Q08423 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Tff1Q08423 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms