Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Ebf1Q07802 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf1Q07802 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.77□□□□□ -0.2
Ebf1Q07802 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
Ebf1Q07802 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf1Q07802 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
Ebf1Q07802 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf1Q07802 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf1Q07802 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Ebf1Q07802 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.77□□□□□ -0.21
Ebf1Q07802 Gm44397-201ENSMUST00000195950 113 ntBASIC13.77□□□□□ -0.21
Ebf1Q07802 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.77□□□□□ -0.21
Ebf1Q07802 AC126253.1-201ENSMUST00000227974 824 ntBASIC13.77□□□□□ -0.21
Ebf1Q07802 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Gm38094-201ENSMUST00000195864 2978 ntBASIC13.77□□□□□ -0.21
Ebf1Q07802 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Ebf1Q07802 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.77□□□□□ -0.21
Ebf1Q07802 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.76□□□□□ -0.21
Ebf1Q07802 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm42853-201ENSMUST00000201273 1387 ntBASIC13.76□□□□□ -0.21
Ebf1Q07802 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC13.76□□□□□ -0.21
Ebf1Q07802 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm38671-201ENSMUST00000200573 130 ntBASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm44974-201ENSMUST00000206387 1279 ntBASIC13.76□□□□□ -0.21
Ebf1Q07802 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.76□□□□□ -0.21
Ebf1Q07802 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Ebf1Q07802 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.75□□□□□ -0.21
Ebf1Q07802 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.75□□□□□ -0.21
Ebf1Q07802 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Ebf1Q07802 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Gm12485-201ENSMUST00000119641 291 ntBASIC13.75□□□□□ -0.21
Ebf1Q07802 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.75□□□□□ -0.21
Ebf1Q07802 Gm38223-201ENSMUST00000194484 695 ntBASIC13.75□□□□□ -0.21
Ebf1Q07802 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.75□□□□□ -0.21
Ebf1Q07802 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Ebf1Q07802 Mir497b-201ENSMUST00000093601 125 ntBASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms