Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Pfdn6Q03958 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.66□□□□□ -0.22
Pfdn6Q03958 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC13.66□□□□□ -0.22
Pfdn6Q03958 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.66□□□□□ -0.22
Pfdn6Q03958 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Mir6956-201ENSMUST00000183598 62 ntBASIC13.66□□□□□ -0.22
Pfdn6Q03958 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.66□□□□□ -0.22
Pfdn6Q03958 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.66□□□□□ -0.22
Pfdn6Q03958 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm15920-201ENSMUST00000118998 402 ntBASIC13.65□□□□□ -0.22
Pfdn6Q03958 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.65□□□□□ -0.22
Pfdn6Q03958 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm43703-201ENSMUST00000200523 763 ntBASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.65□□□□□ -0.22
Pfdn6Q03958 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Pfdn6Q03958 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Pfdn6Q03958 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pfdn6Q03958 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms