Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.4□□□□□ -0.58
Npas1P97459 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
Npas1P97459 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC11.4□□□□□ -0.58
Npas1P97459 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
Npas1P97459 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC11.4□□□□□ -0.58
Npas1P97459 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC11.4□□□□□ -0.58
Npas1P97459 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.4□□□□□ -0.58
Npas1P97459 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Mir5126-201ENSMUST00000175513 77 ntBASIC11.4□□□□□ -0.58
Npas1P97459 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.4□□□□□ -0.58
Npas1P97459 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC11.4□□□□□ -0.58
Npas1P97459 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
Npas1P97459 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Gata3-201ENSMUST00000102976 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
Npas1P97459 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.4□□□□□ -0.59
Npas1P97459 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Npas1P97459 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Npas1P97459 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 AC126549.2-201ENSMUST00000223997 1976 ntBASIC11.39□□□□□ -0.59
Npas1P97459 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Slc44a1-204ENSMUST00000107647 2176 ntTSL 2 BASIC11.39□□□□□ -0.59
Npas1P97459 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Npas1P97459 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Npas1P97459 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Npas1P97459 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC11.39□□□□□ -0.59
Npas1P97459 Gm7977-201ENSMUST00000193787 748 ntBASIC11.39□□□□□ -0.59
Npas1P97459 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.39□□□□□ -0.59
Npas1P97459 Gm17968-201ENSMUST00000194902 784 ntBASIC11.39□□□□□ -0.59
Npas1P97459 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC11.39□□□□□ -0.59
Npas1P97459 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Npas1P97459 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Heatr3-202ENSMUST00000121949 3086 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
Npas1P97459 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Npas1P97459 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Ankrd17-201ENSMUST00000014421 10458 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Slc39a8-205ENSMUST00000167390 3533 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Nudt18-203ENSMUST00000228768 1578 ntBASIC11.38□□□□□ -0.59
Npas1P97459 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Npas1P97459 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.38□□□□□ -0.59
Npas1P97459 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.38□□□□□ -0.59
Npas1P97459 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms