Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC8.99□□□□□ -0.97
PrkdcP97313 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PrkdcP97313 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
PrkdcP97313 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC8.99□□□□□ -0.97
PrkdcP97313 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC8.99□□□□□ -0.97
PrkdcP97313 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 AC154412.1-201ENSMUST00000226540 2786 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC8.99□□□□□ -0.97
PrkdcP97313 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm2517-201ENSMUST00000215651 348 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm40761-201ENSMUST00000219123 1153 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC8.99□□□□□ -0.97
PrkdcP97313 AC166344.1-202ENSMUST00000224139 234 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 AC101945.2-201ENSMUST00000227886 1377 ntBASIC8.99□□□□□ -0.97
PrkdcP97313 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
PrkdcP97313 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Cipc-211ENSMUST00000191463 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm15711-201ENSMUST00000118889 535 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm14005-208ENSMUST00000223654 681 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm7899-201ENSMUST00000192935 1897 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Lypd1-203ENSMUST00000159529 989 ntTSL 2 BASIC8.98□□□□□ -0.97
PrkdcP97313 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm27530-201ENSMUST00000184096 98 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm1821-202ENSMUST00000227415 750 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm43273-201ENSMUST00000199649 2594 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm11980-201ENSMUST00000121445 986 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm37028-201ENSMUST00000194276 107 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC8.98□□□□□ -0.97
PrkdcP97313 Gm33201-201ENSMUST00000204791 855 ntTSL 3 BASIC8.98□□□□□ -0.97
PrkdcP97313 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC8.98□□□□□ -0.97
PrkdcP97313 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
PrkdcP97313 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
PrkdcP97313 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
PrkdcP97313 Gnrhr-202ENSMUST00000094654 1475 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms