Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43bP86448 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC14.01□□□□□ -0.17
Trim43bP86448 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.01□□□□□ -0.17
Trim43bP86448 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43bP86448 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trim43bP86448 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trim43bP86448 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Gm12882-201ENSMUST00000121696 517 ntBASIC14□□□□□ -0.17
Trim43bP86448 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim43bP86448 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14□□□□□ -0.17
Trim43bP86448 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trim43bP86448 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trim43bP86448 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43bP86448 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43bP86448 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Trim43bP86448 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim43bP86448 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim43bP86448 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim43bP86448 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
Trim43bP86448 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.99□□□□□ -0.17
Trim43bP86448 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Trim43bP86448 Mir6977-201ENSMUST00000184960 64 ntBASIC13.99□□□□□ -0.17
Trim43bP86448 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim43bP86448 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.99□□□□□ -0.17
Trim43bP86448 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trim43bP86448 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trim43bP86448 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC13.98□□□□□ -0.17
Trim43bP86448 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.98□□□□□ -0.17
Trim43bP86448 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 Gm6222-201ENSMUST00000120787 396 ntBASIC13.98□□□□□ -0.17
Trim43bP86448 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.98□□□□□ -0.17
Trim43bP86448 Gm27989-201ENSMUST00000184721 107 ntBASIC13.98□□□□□ -0.17
Trim43bP86448 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trim43bP86448 AA619741-201ENSMUST00000195095 646 ntBASIC13.98□□□□□ -0.17
Trim43bP86448 Gm44344-201ENSMUST00000200287 129 ntBASIC13.98□□□□□ -0.17
Trim43bP86448 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.98□□□□□ -0.17
Trim43bP86448 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms