Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.11□□□□□ -0.47
H3f3aP84244 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
H3f3aP84244 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
H3f3aP84244 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.1□□□□□ -0.47
H3f3aP84244 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.1□□□□□ -0.47
H3f3aP84244 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 AC154687.2-201ENSMUST00000223853 640 ntBASIC12.1□□□□□ -0.47
H3f3aP84244 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.1□□□□□ -0.47
H3f3aP84244 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.1□□□□□ -0.47
H3f3aP84244 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
H3f3aP84244 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
H3f3aP84244 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
H3f3aP84244 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
H3f3aP84244 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC12.09□□□□□ -0.47
H3f3aP84244 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm12341-201ENSMUST00000119724 503 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.09□□□□□ -0.47
H3f3aP84244 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm37917-201ENSMUST00000194711 392 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm45668-201ENSMUST00000211271 493 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm18624-201ENSMUST00000220966 658 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm15823-201ENSMUST00000064305 670 ntBASIC12.09□□□□□ -0.47
H3f3aP84244 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.09□□□□□ -0.47
H3f3aP84244 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
H3f3aP84244 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
H3f3aP84244 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
H3f3aP84244 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.47
H3f3aP84244 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
H3f3aP84244 Gm21038-201ENSMUST00000222205 1383 ntBASIC12.08□□□□□ -0.48
H3f3aP84244 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.08□□□□□ -0.48
H3f3aP84244 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
H3f3aP84244 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms